In case of foodborne disease outbreaks, rapid identification of the causative food product is essential, since the medical and economic damages grow with the duration of the outbreak. Recent foodborne disease outbreaks in Europe illustrated that there is a need for a software system capable of supporting investigations on supply chains as well as exposure assessments in crisis situations. To address these needs and based on the experience from these real outbreaks FoodChain-Lab (FCL) has been developed (https://foodrisklabs.bfr.bund.de). It is additionally capable of comprehensive data integration and management assuring highest possible data quality and integrity at any point in time.
The research project aims to disseminate the software FoodChain-Lab in Europe, to support on outbreak investigations and to develop more features of the software, especially on the domain of risk assessment.
2. Why our initiative is of interest to you?
Do you face sometimes a huge and confusing amount of tracing data within an outbreak investigation? Is that a reason for you to decide not to trace back? Do you wonder whether visualisation and analysis of such data could be accomplished faster and easier?
- Unstructured data in tracing is difficult to handle and to understand – FoodChain-Lab has well defined data structures and a guided data collection workflow. Additionally, the project offers to integrate individual data formats for Member States.
- The analysis and visualisation of a huge amount of data is a complicated task that is automatically done by FoodChain-Lab.
- You will have the opportunity to co-determine the direction of the development of a tracing software used all over Europe and steer its focus
3. What can you expect from the project?
- You can participate in workshops about the use of FoodChain-Lab and general tracing aspects. Additionally you can apply for special workshops for and in your country.
- You will have the opportunity to be part of a network of tracing experts from the Member States for experience exchange.
- You will be able to discuss and integrate your needs and wishes into the tool together with subject related software developers.
- You can ask for technical support on data collection, handling, analysis and interpretation using FoodChain-Lab during outbreak investigations.
4. The work plan
The figure above shows a general overview of the different tasks that will be carried out during the project. These tasks fall into the following areas:
Execution of workshops for tracing based on FoodChain-Lab
The FoodChain-Lab team offers to train Member States in the handling of the software FCL. There will be basic training courses that will be announced regularly by the FoodChain-Lab team.
And there will be specific training courses by request of a Member State. These courses will offer the opportunity to address general, but also Member State specific questions and needs.
Establishment of a network of tracing experts
The tracing network is going to provide a forum for regular meetings and discussion on general tracing methodology as well as review and discussion on the collected case studies. By doing case studies on real data on real outbreaks together with the Member States and by reviewing data in the RASFF system and by discussions during the network meetings the understanding of the needs and bottlenecks of tracing will be improved. Interaction between network members in real outbreaks will be supported.
Further development and adaptation of FoodChain-Lab on the needs of the Member States
Identified new feature requests will subsequently be implemented into FoodChain-Lab (e.g. handling new data formats, analysis and visualization enhancements).
FoodChain-Lab is easy to use, but it is necessary to install this software as well as the software framework KNIME. To be able to profit from FCL analyses and visualizations faster and on any computer without installation issues, a browser-ready version of FCL will be created. The confidentiality of data will always be guaranteed.
Define appropriate data exchange formats to connect with traceability systems of food chain partners, Member States and databases from the European Commision.
Many different data formats for the description of supply chains (e.g. flow of food ingredients and food products) exist on the market. To be able to easily import these data into FoodChain-Lab it is necessary to support many exchange formats. It is planned to identify together with interested Member States predefined data formats and to implement the automatic import of them into FoodChain-Lab.
5. The invitation
You are warmly invited to contact us with all your questions and also to provide us with contact details of interested experts within your organisations, so that we can establish the necessary communication channels. We plan to create a network of tracing experts which will regularly exchange experiences and push forward the feasibility of tracing investigations. Besides that we will provide your experts with workshops and any kind of support around the world of FoodChain-Lab. We would also be very happy to consider your way of collecting tracing data for integration into or linkage with the software.
6. We want you to be involved
We want to know your opinion or questions!
Please don’t hesitate to contact us:
German Federal Institute for Risk Assessment (BfR)
Unit Epidemiology, Zoonoses and Antibiotic Resistance
Department Biological Safety
European Food Safety Authority
Assessment and Methodological
Support Unit (AMU)